Alignment of alleles: Common carp (Cyprinus carpio) IGIV1S16

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 Q   I   T   V   T   Q   S   P   S   I   T   A   A   Q   P   G   Q   E   V   R
  AB073342,IGIV1S16*01          CAG ATC ACT GTA ACC CAG AGT CCA TCA ATA ACA GCA GCT CAA CCA GGA CAA GAA GTC AGA

                                                        _________________CDR1-IMGT______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 I   N   C   K   T   S   S   N   V   Y   G   G   N   Y                   L   A
  AB073342,IGIV1S16*01          ATA AAC TGT AAA ACC AGC AGT AAT GTG TAT GGT GGT AAT TAT ... ... ... ... TTA GCC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   L   Q   K   P   G   E   A   P   K   L   L   I   Y   W   A   T
  AB073342,IGIV1S16*01          TGG TAC TTA CAG AAA CCT GGA GAA GCT CCT AAA CTC CTC ATA TAT TGG GCA ACA ... ...

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     S   R   Y   T   G   T   P       S   R   F   S   G   S   G
  AB073342,IGIV1S16*01          ... ... ... ... ... AGC CGT TAC ACT GGA ACT CCA ... TCT AGA TTC AGT GGC AGT GGA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                         S   N   S   D   F   T   L   T   I   S   G   V   Q   T   E   D   T   G
  AB073342,IGIV1S16*01          ... ... TCT AAC AGT GAT TTC ACT CTG ACC ATC AGT GGA GTC CAG ACT GAA GAC ACA GGA

                                                _____________CDR3-IMGT__________________
                                101 102 103 104 105 106 107 108 109 110 111 112 113 114
                                 D   Y   Y   C   Q   S   Y   H   E   I   S   S   K   A
  AB073342,IGIV1S16*01          GAT TAT TAC TGT CAG AGT TAC CAT GAG ATC AGC AGT AAA GCT  #c
#c: rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 15/04/2003
Author: Nathalie Bosc